Jean,
I'm not 100% sure I'm with you on this one. . . Yes, the intercooler with cause the greatest amount of heat transfer that it can with the highest incoming air temperature (I think that is basically what your saying), HOWEVER the water/methanol injectant also does its best work when injected into the highest temperature environment.
Most people choose not to inject water/methanol pre-intercooler, due to the potential for puddling in the intercooler. There are some people though, who have gotten good results by using a small nozzle prior to the intercooler to keep the intercooler from heat-soaking, and then use a bigger nozzle after the intercooler to inject the bulk of the injectant. In this thread, Richard Lamb of Aquamist documented the benefits of a small nozzle before the intercooler (or more precisely, what can happen if you don't have it):
http://www.aquamist.co.uk/phpBB2/viewtopic.php?t=12
It seems that while the phase change of water, with its high latent heat, from liquid to gas does hold the potential to take a lot of heat out of the induction stream, this effect is much more pronounced in the combustion chamber. This is what makes it such a great knock suppressor.
Conversely, the methanol seems to do a better job of cooling the induction stream, and also is a high octane fuel that carries its own oxygen, so you can inject a ton of it, which also does a lot of cooling. Obviously there are merits to injecting both, but the location of the nozzles doesn't necessarily follow the simple logic you've laid out here. . . It seems that there is a lot of needed testing to be done, and the datalogging potential of MS3 makes it the perfect vehicle for so doing! (as with so many other reasons to be excited about it!)
Anyway. food for thought,
Thad